NONINVASIVE PREIMPLANTATION GENETIC TESTING FOR ANEUPLOIDY
Lisitsyna OI Ekimov AN, Atapina EE, Syrkasheva AG, Goryainova EG, Makarova NP, Trofimov DYu, Dolgushina NV
Kulakov National Medical Research Center for Obstetrics, Gynecology and Perinatology, Moscow, Russia
To date the world community is actively working to optimize the approaches to determining chromosomal abnormalities in embryos. The study was aimed to assess the possibility of using noninvasive preimplantation genetic testing for aneuploidy (niPGT-A) through analysis of cell-free DNA in spent culture medium (SCM). We conducted niPGT-A of aneuploid embryos by analysis of cell-free DNA in SCM. All blastocysts were considered to be aneuploid based on the results of previous preimplantation genetic testing for aneuploidy (PGT-A) with trophectoderm (TE) biopsy. The study involved 11 embryos from seven couples. All the embryos were warmed and individually cultured in the 10 |L drops for 9 h. All SCM was collected and analyzed by niPGT-A. The results obtained were tested for concordance with previous PGT-A data. A total of 12 SCM samples were assessed: 11 samples, in which the embryos were cultured, and one control sample. Chaotic niPGT-A results not allowing the karyotype diagnosis were obtained in one case (9.1%) out of 11. Full concordance of the PGT-A and niPGT-A results was revealed in seven cases out of 10 (70%), while clinical concordance was found in nine cases out of 10 (90%). In one case (10%), the blastocyst was considered to have euploid karyotype based on the niPGT-A data. It has been concluded that niPGT-A can be a promising method of preimplantation embryonal chromosomal status diagnosis that requires no biopsy.
Keywords: noninvasive preimplantation genetic testing, noninvasive PGT-A, niPGT-A, PGT-A, spent culture medium, SCM, trophectoderm biopsy, aneuploidy, cell-free DNA
Funding: the study was supported by the Russian Foundation for Basic Research under research project №23-25-00346.
Author contribution: Makarova NP Lisitsyna OI, Dolgushina NV — study concept and design; Lisitsyna OI, Makarova NP Dolgushina NV Syrkasheva AG, Ekimov AN — manuscript writing and editing; Lisitsyna OI — statistical processing of the results; Goryainova EG, Makarova NP — biomaterial collection; Ekimov AN, Atapina EE — laboratory phase; Dolgushina NV Trofimov DYu — publication approval.
Compliance with ethical standards: the study was approved by the Ethics Committee of the Kulakov National Medical Research Center for Obstetrics, Gynecology and Perinatology (protocol № 10 of 28 October 2021). The patients submitted the informed consent to study participation.
123 Correspondence should be addressed: Olga I. Lisitsyna
Akademika Oparina, 4, Moscow, 117997, Russia; [email protected]
Received: 18.06.2023 Accepted: 09.08.2023 Published online: 30.08.2023
DOI: 10.24075/brsmu.2023.034
НЕИНВАЗИВНОЕ ПРЕИМПЛАНТАЦИОННОЕ ГЕНЕТИЧЕСКОЕ ТЕСТИРОВАНИЕ НА АНЕУПЛОИДИИ
О. И. Лисицына н , А. Н. Екимов, Е. Е. Атапина, А. Г. Сыркашева, Е. Г. Горяйнова, Н. П. Макарова, Д. Ю. Трофимов, Н. В. Долгушина
Национальный медицинский исследовательский центр акушерства, гинекологии и перинатологии имени В. И. Кулакова, Москва, Россия
В настоящее время в мире идет активная работа по оптимизации применения подходов к определению хромосомной патологии эмбрионов. Целью исследования было оценить возможность использования неинвазивного преимплантационного генетического тестирования на анеуплоидии (ниПГТ-А) путем анализа внеклеточной ДНК в отработанной культуральной среде (ОКС). Проведено ниПГТ-А анеуплоидных эмбрионов путем анализа внеклеточной ДНК в ОКС. Все бластоцисты были анеуплоидными по результатам предшествующего преимплантационного генетического тестирования на анеуплоидии (ПГТ-А) с биопсией трофэктодермы (ТФЭ). В исследование было включено 11 эмбрионов от семи супружеских пар. Все эмбрионы размораживали и культивировали в каплях по 10 мкл в течение 9 ч. Весь объем ОКС собирали и анализировали путем ниПГТ-А. Полученные результаты сравнивали на соответствие с предшествующими данными по ПГТ-А. Суммарно выполнили анализ 12 образцов ОКС: 11 образцов, в которых были культивированы эмбрионы, и один контрольный образец. В одном случае (9,1%) из 11 были получены хаотичные результаты по данным ниПГТ-А, не позволяющие провести диагностику состояния кариотипа. Полное соответствие результатов ПГТ-А и ниПГТ-А получено в семи случаях из 10 (70%), клиническое соответствие результатов — в девяти случаях из 10 (90%). В одном случае (10%) по данным ниПГТ-А кариотип бластоцисты был диагностирован как эуплоидный. Вывод: ниПГТ-А может быть перспективным, не требующим биопсии, методом диагностики хромосомного статуса преимплантационных эмбрионов.
Ключевые слова: неинвазивное преимплантационное генетическое тестирование, неинвазивное ПГТ-А, ниПГТ-А, ПГТ-А, отработанная культуральная среда, ОКС, биопсия трофэктодермы, анеуплоидия, внеклеточная ДНК
Финансирование: исследование выполнено при финансовой поддержке РНФ в рамках научного проекта №23-25-00346.
Вклад авторов: Н. П. Макарова, О. И. Лисицына, Н. В. Долгушина — концепция и дизайн исследования; О. И. Лисицына, Н. П. Макарова, Н. В. Долгушина, А. Г Сыркашева, А. Н. Екимов — написание и редактирование текста; О. И. Лисицына — статистическая обработка результатов; Е. Г. Горяйнова, Н. П. Макарова — сбор биологического материала; А. Н. Екимов, Е. Е. Атапина — лабораторный этап; Н. В. Долгушина, Д. Ю. Трофимов — утверждение публикации.
Соблюдение этических стандартов: исследование одобрено этическим комитетом ФГБУ «Национальный медицинский исследовательский центр акушерства, гинекологии и перинатологии имени В. И. Кулакова» (протокол № 10 от 28 октября 2021 г.). Пациенты подписали добровольное информированное согласие на участие в исследовании.
[X] Для корреспонденции: Ольга Игоревна Лисицына
ул. Академика Опарина, д. 4, г. Москва, 117997, Россия; [email protected]
Статья получена: 18.06.2023 Статья принята к печати: 09.08.2023 Опубликована онлайн: 30.08.2023 DOI: 10.24075/vrgmu.2023.034
Preimplantation genetic testing (PGT) was introduced into clinical practice in the late 1980s (it was previously referred to as preimplantation genetic diagnosis (PGD) or preimplantation genetic screening). The first PGD programs were aimed to avoid the X-linked inheritance. The range of detecting possible genetic disorders expanded significantly with subsequent development of the embryological and laboratory phase technologies, and the new goals of the methods were both preventing genetic disorders and improving the chances of giving birth to a healthy child in difficult categories of the assisted reproductive technology (ART) patients [1].
Currently, preimplantation genetic testing for aneuploidy (PGT-A) by next generation sequencing (NGS) with trophectoderm (TE) biopsy has become the most effective method that is more and more widely used with the development of the capabilities of embryological and genetic laboratories. Numerous studies demonstrate high sensitivity and specificity of this approach, however, the need for invasive interventions still represents one of its drawbacks [1, 2].
Embryonic mosaicism and concordance between the embryo's TE chromosomal pattern and its inner cell mass (ICM) are the other issues that attract the researchers' attention [3, 4]. Despite the fact that biopsy of several cells makes it possible to partially overcome the above shortage, it is impossible to completely eliminate the risk of rejection of the embryo, the transfer of which into the uterine cavity can result in giving birth to a healthy baby.
Noninvasive analysis of cell-free DNA in spent culture medium (SCM), in which the embryo has developed, is a new promising PGT-A technology. Certain conditions of the embryo culture and medium sample collection are required to obtain adequate results (to increase the DNA concentration and reduce possible contamination), however, no invasive intervention is needed [5-7]. A number of researchers believe that noninvasive preimplantation genetic testing for aneuploidy (niPGT-A) is a more helpful PGT-A method, particularly because of the fact that, according to the literature, cell-free DNA contained in SCM originates not only from the TE cells, but also from the ICM [8, 9]. Other authors, on the contrary, argue that it is unrepresentative, since the issue of the true origin of cell-free DNA contained in SCM is yet to be resolved [10, 11]. Anyway, this approach is extensively studied by the researchers and can probably be used in clinical practice.
The study was aimed to assess the efficiency of niPGT-A. For that we conducted re-analysis of blastocysts, that were considered to be aneuploid based on PGT-A with TE biopsy, by niPGT-A.
METHODS
Embryological phase was implemented at the B.V. Leonov Department of Assisted Technologies in Infertility Treatment; PGT-A and niPGT-A were performed in the Institute of Reproductive Genetics.
The study involved 11 embryos from seven couples. All blastocysts were considered to be aneuploid based on previous PGT-A with TE biopsy. The embryos were obtained in ART cycles with PGT-A by NGS in April-September 2020.
Embryo culture, TE biopsy and PGT-A
Fertilization of oocytes was performed by intracytoplasmic sperm injection (ICSI), after that the fertilized cells were transferred to the Continuous Single Culture Complete (CSCM) medium (IrvineScientific; USA). All embryo culture steps and
morphological assessment of blastocysts were performed in accordance with the previously reported method [12]. On day 5-6 after fertilization, TE cell biopsy was performed in embryos, the quality of which was considered to be excellent or good according to morphological criteria. Borosilicate glass needles were used for biopsy. After biopsy the embryos were subjected to cryopreservation by vitrification in accordance with the instructions of the culture media manufacturer. The cells obtained were transported to the laboratory in the Eppendorf tubes containing the lysis buffer and stored at a temperature of -20 °C until subjected to further analysis. PGT-A was performed by next generation sequencing (NGS) using the Illumina platform (Illumina; USA) in accordance with the manufacturer's protocol. The results obtained were processed using the SeqVario software (DNA-Technology; Russia).
Embryo thawing and culture, spent culture medium collection
The donated embryos were thawed in the Kitazato media (Kitazato; Japan) in accordance with the manufacturer's protocol. After that blastocysts were individually cultured in 10 pL microdroplets of the CSCM medium for 9 h. A drop of the culture medium (1 sample) kept in the same culture conditions, but containing no embryo, was used as a negative control. All spent culture medium was collected in the Eppendorf tubes and transferred to the laboratory, where the tubes were stored at a temperature of -20 °C for 14 days until used for further analysis.
Noninvasive preimplantation genetic testing for aneuploidy
NiPGT-A was performed using the NICSInst kits (Yicon Genomics; China) in accordance with the manufacturer's instructions. The next generation sequencing was carried out in the NextSeq unit (Illumina; USA). The results obtained were analyzed using the original algorithms and software tools developed by the Center for PGT-A by SeqVario NGS.
Analysis of the results
Statistical analysis was performed using the Jamovi software package (freely distributed statistical software package). The results obtained were tested for concordance with the earlier reported PGT-A data. The full chromosome ploidy concordance rate (based on the PGT-A and niPGT-A data) was considered to be a primary endpoint of the study. The diagnostic concordance rate (euploid/aneuploid) of the embryos based on the PGT-A and niPGT-A data was a secondary endpoint. Binary categorical data were specified as absolute numbers N and the percentage of the total value for group P in the N format (P%). Binomial test was used to determine statistical significance of full and clinical concordance of the results. The significance level (p) was set at 0.05.
RESULTS
A total of 12 SCM samples were analyzed: 11 samples, in which the embryos were cultures, and one control sample. All samples of the study group successfully went through whole-genome amplification and analysis by NGS. No DNA was detected in the control sample. The PGT-A and niPGT-A results along with the concordance of these results for the studied embryos are provided in Table 1.
Table 1. Results of the studied embryos' PGT-A and niPGT-A
№ PGT-A results nIPGT-A results Full concordance (+/-) Diagnostic concordance (+/-) Sex concordance
1 (11)x3 Sex - XX (11)x3 Sex - XX + + +
2 (20)x3, (21)x1 Sex - XX (20)x3, (21)x1 Sex - XX + + +
3 (17)x1, (22)x1 Sex - XY (17)x1, (22)x1 Sex - XY + + +
4 (8)x3, (21)x1 "heteroploid"
5 (22)x3 Sex - XY (22)x3 Sex - XY + + +
6 (8)x1, (18)x3, (22)x1 Sex - XX (8)x1, (18)x3, (22)x1 Sex - XX + + +
7 (15)x3, (17)x3 Sex - XY (15)x3, (17)x3 Sex - XY + + +
8 (21)x3 Sex - XY (15)x1,(21)x3 Sex - XY - + +
9 (22)x3 Sex - XY Del 5(p) Sex - XX - + -
10 (21)x2,5 Sex - XY N, XY - - +
11 (16)x3 Sex - XY (16)x3 Sex - XY + + +
It is noteworthy that chaotic niPGT-A results not allowing the karyotype diagnosis were obtained in one case (9.1%) out of 11 (Fig. 1).
We failed to detect aneuploidy in an embryo based on the niPGT-A data in one case out of 10 (10%) due to high noise level, that is why the result was considered to be "euploid" (Fig. 2).
Full concordance of the results was obtained in seven cases out of 10 (70%) (Fig. 3). Concordance of the results based on sex chromosomes was determined in nine cases out of 10 (90%). Clinical concordance of the results was found in nine cases out of 10 (90%).
Comparison of full and clinical concordance between the PGT-A and niPGT-A results is provided in Table 2. Binomial test revealed no significant differences in the rate of full concordance between the PGT-A and niPGT-A results (p = 0.344), however, a significant result was obtained for diagnostic concordance between the PGT-A and niPGT-A data (p = 0.021).
When assessing the results in accordance with the intention to study, i.e. when assessing all 11 embryos that were included in the study in practical terms, the results obtained meant that in 81.8% of cases the clinical decision about the possibility of embryo transfer in the uterine cavity would remain unchanged. In 9.1% of cases, the clinical decision about the possibility of embryo transfer made based on the niPGT-A data only would be different (an euploid embryo was recommended for transfer). It was impossible to make a clinical decision about the possibility of embryo transfer in 9.1% of cases.
DISCUSSION
The study planned as a pilot project was limited by small sample size, availability of aneuploid embryos only (based on the PGT-A
data), no analysis of the ICM chromosomal composition in the studied blastocysts. Nevertheless, the study results showed that cell-free DNA (cfDNA) was detected in SCM in 100% of cases, a high proportion of results appropriate for clinical interpretation (90.9%) was also reported.
In the majority of studies conducted so far the data of PGT-A with TE biopsy have been considered as reference data and compared with the niPGT-A results. The concordance rate of the results in these studies is 33.3-89.1% [5, 8, 13-17]. However, it should be noted that the above papers more often described the protocol for niPGT-A in a fresh cycle. Our study involved the protocol for thawed embryos, and the concordance rate was consistent with the data of the above studies (full concordance in 70% of cases, diagnostic concordance in 90% of cases).
In other studies the whole embryo was considered as a reference, and SCM was collected after the post-thawing embryo culture. The concordance rate of the niPGT-A and PGT-A results for the whole embryo in such studies varied between 32.2-89.9%. Xu et al. assessed SCM of the thawed D3 embryos after culturing to 5 days. Among 42 embryos, assessment of 66.7% showed full concordance of the results [18]. Yin et al. assessed SCM of 75 thawed D5-D6 blastocysts after culturing for 24 h. The diagnostic concordance rate of the results was 89.8%, while full concordance rate was 32.2% [19]. Huang et al. managed to get information about SCM of 48 D5-D6 embryos out of 52 after thawing and culturing for 24 h. Full concordance rate of the results was 85.4% [9]. Shitara et al. reported full concordance rate of 56.3% when assessing SCM after thawing and culturing 5D embryos for 24 h and 6D embryos for 3 h [20]. Xu et al. assessed 35 thawed 3D and 5D embryos. The minimum incubation time was 24 h.
Fig. 1. An example of "heteroploid" niPGT-A result
Fig. 2. Results of the embryo PGT-A and niPGT-A showing discordance between the PGT-A and niPGT-A data: the upper curve shows aneuploidy based on the PGT-A data, the lower curve shows euploidy based on the niPGT-A data.
PGT-A (22) х 3, XY
i
3 4 5 6 7
10 11 12 13 14 15 16 17 18 1920 2122
niPGT-A (22) х 3, XY
2-
1
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• ■- - »■>___^
a
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3 4 5 6 7
9 10 11 12 13 14 15 16 17 13 1920 21 22 X V
Fig. 3. An example of full concordance of the results based on the PGT-A and nIPGT-A data
A total of 88.6% SCM samples successfully went through whole-genome amplification. Full concordance rate of the ICM niPGT-A and PGT-A results was 58.3% (14/24) [21].
It should be noted that the culture medium drop volume in these studies involving culturing thawed embryos varied between 10-30 pL, while the test sample volume was 3.5-25 pL. Incubation time was at least 24 h in the majority of cases. Our study demonstrated successful detection and analysis of cfDNA in SCM when culturing thawed blastocysts for 9 h in the 10 pL drops, thereby showing the possibility of obtaining adequate results after culturing thawed embryos within a shorter time period.
Of particular interest is the study of additional options to use niPGT-A in clinical practice. Noteworthy is the paper, the authors of which performed niPGT-A for mosaic embryos based on the results of previous PGT-A with TE biopsy. They thawed and re-cultured 41 mosaic embryos for 14-18 h, then performed PGT-A with TE biopsy of the whole embryo and SCM niPGT-A. The results of ICM assessment showed that 84.4% of embryos (35/41) had normal chromosome pattern. The niPGT-A data were concordant with the results of PGT-A based on the whole embryo biopsy in 74.4% of cases [22]. In the paper published the authors reported retrospective data on the transfer of mosaic embryos in 60 couples having no euploid embryos. Clinical pregnancy was later diagnosed in 30 patients. Thus, the researchers assumed that additional use of niPGT-A in such clinical cases had some possible benefits.
In our study we also obtained one "euploid" niPGT-A result for aneuploid embryo (karyotype (21) x 1.5) based on the data of previous PGT-A with TE biopsy. Furthermore, no abnormality of the 21st pair of chromosomes was detected (Fig. 2). Given the above, it is reasonable to collect SCM in the cycles with PGT-A in order to explore the possibility of additional niPGT-A use for more correct diagnosis in complicated or questionable cases (if necessary).
Also of interest is the paper published in 2022 focused on assessing the chances of the clinical use of niPGT-A in the thawed embryo transfer ART cycles [23]. The embryos were thawed and cultured in the 20 pL drops for 6 h in all cases until transferred into the uterine cavity. The authors retrospectively assessed the outcomes of thawed embryo transfer in 210 patients based on the niPGT-A results. The rates of clinical pregnancy, ongoing pregnancy and live birth were significantly higher in embryos that were considered to be euploid based on niPGT-A compared to aneuploid embryos (56.2% vs. 29.4%). However, no differences in the above reproductive outcomes between "euploid" and "chaotic" embryos were revealed based on the niPGT-A data (56.2% vs. 60.4%). The percentage of aneuploid embryos was significantly higher among the embryos that were considered to be of low or medium quality based on morphological features compared to the good quality embryos (46%, 34.6% and 21.5%, respectively; p = 0.013). The researchers noted a possible advantage of using a combination
Table 2. Comparison of the rates of full and clinical concordance between the PGT-A and niPGT-A results based on the binomial test data
Concordance Yes/No Share Total Proportion р
Full Yes 7 10 0.7 р= 0.344
No 3 0.3
Diagnostic Yes 9 10 0.9 р= 0.021
No 1 0.1
approach (morphological assessment in combination with niPGT-A) to selection of the most promising embryo in terms of transfer into the uterine cavity. Furthermore, the authors proposed to rank the embryos in order of decreasing priority for embryo transfer in the following way: 1) good quality euploid embryos; 2) good quality "chaotic" embryos; 3) euploid embryos of medium quality based on morphological features; 4) "chaotic" embryos of medium quality based on morphological features.
It should be emphasized that other researchers also recommend to interpret chaotic niPGT-A results with caution, since such results are more likely to reflect the biomaterial storage conditions and DNA degradation processes than the embryos' chromosomal patterns [8, 24]. In our study we have also obtained chaotic niPGT-A results in one case (9.1%) (Fig. 1).
Thus, it should be noted that dealing with cfDNA and niPGT-A has some features that should be taken into account when interpreting the results and selecting the most promising
embryos for transfer into the uterine cavity. However, the non-invasive nature of the method should be noted as its chief feature. Considering the fact that a number of scientific papers report the data indicative of possible adverse effects of TE biopsy on the course of pregnancy (hypertensive disorders, premature birth, placental disorders) and the health of newborns, it is the study of niPGT-A that seems to be the most relevant [25-27]. However, it should be noted that no such correlations have been revealed in a large number of other studies [28-30].
CONCLUSIONS
Noninvasive preimplantation genetic testing for aneuploidy is a promising new method to assess the embryo's chromosomal status that does not require biopsy. Further research is necessary to further develop and improve the method, as well as to determine the possibility and indications for the use of method in clinical practice.
References
1. Sciorio R, Tramontano L, Catt J. Preimplantation genetic diagnosis (PGD) and genetic testing for aneuploidy (PGT-A): status and future challenges. Gynecol. Endocrinol. 2020; 36 (1): 6-11.
2. Malysheva OV, Pendina AA, Efimova OA, Chiryaeva OG. Predymplantacionnoe geneticheskoe testirovanie. V knige: Kogan I. Yu., redaktor. Ehkstrakorporal'noe oplodotvorenie: prakticheskoe rukovodstvo dlya vrachej. M.: GEhOTAR-Media, 2021; s. 357-67. Russian.
3. Zhigalina DI, Skryabin NA, Kanbekova OR, Artyukhova VG, Svetlakov AV, Lebedev IN. Comparative cytogenetics of embryoblast, trophectoderm and blastocoele fluid of human blastocyst. Medical Genetics. 2018; 17 (2): 46-52. Russian.
4. Makarova NP Ekimov AN, Kulakova EV, Drapkina YuS, Sysoeva AP, Krasnova NA, et. al. Characteristics of embryonic mosaicism in infertility treatment with assisted reproductive technologies. Obstetrics and gynecology. 2021; (7): 144-51. Russian.
5. Navarro-Sánchez L, García-Pascual C, Rubio C, Simón C. Non-invasive preimplantation genetic testing for aneuploidies: an update. Reprod. Biomed. Online. 2022; 44 (5): 817-28.
6. Brouillet S, Martinez G, Coutton C, Hamamah S. Is cell-free DNA in spent embryo culture medium an alternative to embryo biopsy for preimplantation genetic testing? A systematic review. Reprod. Biomed. Online. 2020; 40 (6): 779-6.
7. Lisitsyna OI, Makarova NP, Dolgushina NV. Evaluation of extracellular DNA as a method for non-invasive preimplantation genetic testing of embryos in infertility treatment programs using assisted reproductive technologies. Obstetrics and gynecology. 2022; (6): 13-19. Russian.
8. Rubio C, Navarro-Sánchez L, García-Pascual CM, Ocali O, Cimadomo D, Venier W, et al. Multicenter prospective study of concordance between embryonic cell-free DNA and trophectoderm biopsies from 1301 human blastocysts. Am J Obstet Gynecol. 2020; 223 (5): 751.e1-13.
9. Huang L, Bogale B, Tang Y, Lu S, Xie XS, Racowsky C. Noninvasive preimplantation genetic testing for aneuploidy in spent medium may be more reliable than trophectoderm biopsy. Proc Natl Acad Sci USA. 2019; 116 (28): 14105-12.
10. Rubio C, Racowsky C, Barad DH, Scott RT, Simon C. Noninvasive preimplantation genetic testing for aneuploidy in spent culture medium as a substitute for trophectoderm biopsy. Fertil Steril. 2021; 115 (4): 841-9.
11. Tomic M, Vrtacnik Bokal E, Stimpfel M. Non-invasive preimplantation genetic testing for aneuploidy and the mystery of genetic material: a review article. Int J Mol Sci. 2022; 23 (7): 3568.
12. Makarova NP, Lisitsyna OI, Nepsha OS, Krasnyi AM, Sadekova AA, Nezlina AL, et al. Mitichondrial DNA expression profile in embryo culture medium in assisted reproductive technology. Obstetrics
and gynecology. 2022; (3): 89-96. Russian.
13. Chen L, Sun Q, Xu J, Fu H, Liu Y, Yao Y, et al. A Non-invasive Chromosome Screening Strategy for Prioritizing in vitro Fertilization Embryos for Implantation. Front Cell Dev Biol. 2021; 9: 708322.
14. Ho JR, Arrach N, Rhodes-Long K, Ahmady A, Ingles S, Chung K, et al. Pushing the limits of detection: investigation of cell-free DNA for aneuploidy screening in embryos. Fertil Steril. 2018; 110 (3): 467-475.e2.
15. Rubio C, Rienzi L, Navarro-Sánchez L, Cimadomo D, García-Pascual CM, Albricci L, et al. Embryonic cell-free DNA versus trophectoderm biopsy for aneuploidy testing: concordance rate and clinical implications. Fertil Steril. 2019; 112 (3): 510-19.
16. Vera-Rodriguez M, Diez-Juan A, Jimenez-Almazan J, Martinez S, Navarro R., Peinado V, et al. Origin and composition of cellfree DNA in spent medium from human embryo culture during preimplantation development. Hum Reprod. 2018; 33 (4): 745-56.
17. Yeung QSY, Zhang YX, Chung JPW, Lui WT, Kwok YKY, Gui B, et al. A prospective study of non-invasive preimplantation genetic testing for aneuploidies (NiPGT-A) using next-generation sequencing (NGS) on spent culture media (SCM). J Assist Reprod Genet. 2019; 36 (8): 1609-21.
18. Xu J, Fang R, Chen L, Chen D, Xiao JP, Yang W, et al. Noninvasive chromosome screening of human embryos by genome sequencing of embryo culture medium for in vitro fertilization. Proc Natl Acad Sci USA. 2016; 113 (42): 11907-12.
19. Yin B, Zhang H, Xie J, Wei Y, Zhang C, Meng L. Validation of preimplantation genetic tests for aneuploidy (PGT-A) with DNA from spent culture media (SCM): concordance assessment and implication. Reprod Biol Endocrinol. 2021; 19 (1): 41.
20. Shitara A, Takahashi K, Goto M, Takahashi H, Iwasawa T, Onodera Y, et al. Cell-free DNA in spent culture medium effectively reflects the chromosomal status of embryos following culturing beyond implantation compared to trophectoderm biopsy. PLoS One. 2021; 16 (2): e0246438.
21. Xu CL, Wei YQ, Tan QY, Huang Y, Wu JJ, Li CY, et al. Concordance of PGT for aneuploidies between blastocyst biopsies and spent blastocyst culture medium. Reprod Biomed. 2023; 46 (3): 483-90.
22. Li X, Hao Y, Chen D, Ji D, Zhu W, Zhu X, et al. Non-invasive preimplantation genetic testing for putative mosaic blastocysts: a pilot study. Hum Reprod. 2021; 36 (7): 2020-34.
23. Chen R, Tang N, Du H, Yao Y, Zou Y, Wang J, et al. Clinical application of noninvasive chromosomal screening for elective single-blastocyst transfer in frozen-thawed cycles. J Transl Med. 2022; 20 (1): 553.
24. Rubio C, Simón C. Noninvasive preimplantation genetic testing for aneuploidy: Is the glass half-empty or half-full? Fertil. Steril.
2021; 115 (6): 1426-7.
25. Kakourou G, Mamas T, Vrettou C, Traeger-Synodinos J. An Update on Non-invasive Approaches for Genetic Testing of the Preimplantation Embryo. Curr Genomics. 2022; 23 (5): 337-52.
26. Alteri A, Cermisoni GC, Pozzoni M, Gaeta G, Cavoretto PI, Vigano P. Obstetric, neonatal, and child health outcomes following embryo biopsy for preimplantation genetic testing. Hum Reprod Updat. 2023; 29 (3): 291-306.
27. Makhijani R, Bartels CB, Godiwala P, Bartolucci A, DiLuigi A, Nulsen J, et al. Impact of trophectoderm biopsy on obstetric and perinatal outcomes following frozen-thawed embryo transfer cycles. Hum Reprod. 2021; 36 (2): 340-8.
Литература
1. Sclorlo R, Tramontano L, Catt J. Preimplantation genetic diagnosis (PGD) and genetic testing for aneuploidy (PGT-A): status and future challenges. Gynecol. Endocrinol. 2020; 36 (1): 6-11.
2. Малышева О. В., Пендина А. А., Ефимова О. А., Чиряева О. Г. Предымплантационное генетическое тестирование. В книге: Коган И. Ю., редактор. Экстракорпоральное оплодотворение: практическое руководство для врачей. М.: ГЭОТАР-Медиа, 2021;с.357-67.
3. Жигалина Д. И., Скрябин Н. А., Канбекова О. Р., Артюхова В. Г., Светлаков А. В., Лебедев И. Н. Сравнительная цитогенетика эмбриобласта, трофэктодермы и внутриполостной жидкости бластоцисты человека. Медицинская генетика. 2018; 17 (2): 46-52.
4. Макарова Н. П., Екимов А. Н., Кулакова Е. В., Драпкина Ю. С., Сысоева А. П., Краснова Н. А. и др. Особенности мозаицизма у эмбрионов человека в программах лечения бесплодия методами вспомогательных репродуктивных технологий. Акушерство и гинекология. 2021; (7): 144-51.
5. Navarro-Sánchez L, García-Pascual C, Rubio C, Simón C. Noninvasive preimplantation genetic testing for aneuploidies: an update. Reprod. Biomed. Online. 2022; 44 (5): 817-28.
6. Brouillet S, Martinez G, Coutton C, Hamamah S. Is cell-free DNA in spent embryo culture medium an alternative to embryo biopsy for preimplantation genetic testing? A systematic review. Reprod. Biomed. Online. 2020; 40 (6): 779-6.
7. Лисицына О. И., Макарова Н. П., Долгушина Н. В. Оценка внеклеточной ДНК как метод неинвазивного преимплантационного генетического тестирования эмбрионов в программах лечения бесплодия методами вспомогательных репродуктивных технологий. Акушерство и гинекология. 2022; 6: 13-19.
8. Rubio C, Navarro-Sánchez L, García-Pascual CM, Ocali O, Cimadomo D, Venier W, et al. Multicenter prospective study of concordance between embryonic cell-free DNA and trophectoderm biopsies from 1301 human blastocysts. Am J Obstet Gynecol. 2020; 223 (5): 751.e1-13.
9. Huang L, Bogale B, Tang Y, Lu S, Xie XS, Racowsky C. Noninvasive preimplantation genetic testing for aneuploidy in spent medium may be more reliable than trophectoderm biopsy. Proc Natl Acad Sci USA. 2019; 116 (28): 14105-12.
10. Rubio C, Racowsky C, Barad DH, Scott RT, Simon C. Noninvasive preimplantation genetic testing for aneuploidy in spent culture medium as a substitute for trophectoderm biopsy. Fertil Steril. 2021; 115 (4): 841-9.
11. Tomic M, Vrtacnik Bokal E, Stimpfel M. Non-invasive preimplantation genetic testing for aneuploidy and the mystery of genetic material: a review article. Int J Mol Sci. 2022; 23 (7): 3568.
12. Макарова Н. П., Лисицына О. И., Непша О. С., Красный А. М., Садекова А. А., Незлина Е. А. и др. Особенности профиля экспрессии митохондриальной ДНК в среде культивирования эмбрионов в программах вспомогательных репродуктивных технологий. Акушерство и гинекология. 2022; (3): 89-96.
13. Chen L, Sun Q, Xu J, Fu H, Liu Y, Yao Y, et al. A Non-invasive Chromosome Screening Strategy for Prioritizing in vitro Fertilization Embryos for Implantation. Front Cell Dev Biol. 2021; 9: 708322.
14. Ho JR, Arrach N, Rhodes-Long K, Ahmady A, Ingles S, Chung K, et al. Pushing the limits of detection: investigation of cell-free DNA
28. Awadalla MS, Park KE, Latack KR, McGinnis LK, Ahmady A, Paulson RJ. Influence of Trophectoderm Biopsy Prior to Frozen Blastocyst Transfer on Obstetrical Outcomes. Reprod Sci. 2021; 28 (12): 3459-65.
29. He H, Jing S, Lu CF, Tan YQ, Luo KL, Zhang SP, et al. Neonatal outcomes of live births after blastocyst biopsy in preimplantation genetic testing cycles: a follow-up of 1,721 children. Fertil Steril. 2019; 112 (2): 82-88.
30. Swanson K, Huang D, Kaing A, Blat C, Rosenstein MG, Mok-Lin E, et al. Is Preimplantation Genetic Testing Associated with Increased Risk of Abnormal Placentation After Frozen Embryo Transfer? Am J Perinatol. 2021; 38 (2): 105-10.
for aneuploidy screening in embryos. Fertil Steril. 2018; 110 (3): 467-475.e2.
15. Rubio C, Rienzi L, Navarro-Sánchez L, Cimadomo D, García-Pascual CM, Albricci L, et al. Embryonic cell-free DNA versus trophectoderm biopsy for aneuploidy testing: concordance rate and clinical implications. Fertil Steril. 2019; 112 (3): 510-19.
16. Vera-Rodriguez M, Diez-Juan A, Jimenez-Almazan J, Martinez S, Navarro R, Peinado V, et al. Origin and composition of cellfree DNA in spent medium from human embryo culture during preimplantation development. Hum Reprod. 2018; 33 (4): 74б-б6.
17. Yeung QSY, Zhang YX, Chung JPW, Lui WT, Kwok YKY, Gui B, et al. A prospective study of non-invasive preimplantation genetic testing for aneuploidies (NiPGT-A) using next-generation sequencing (NGS) on spent culture media (SCM). J Assist Reprod Genet. 2019; 36 (8): 1609-21.
1S. Xu J, Fang R, Chen L, Chen D, Xiao JP, Yang W, et al. Noninvasive chromosome screening of human embryos by genome sequencing of embryo culture medium for in vitro fertilization. Proc Natl Acad Sci USA. 2016; 113 (42): 11907-12.
1Q. Yin B, Zhang H, Xie J, Wei Y, Zhang C, Meng L. Validation of preimplantation genetic tests for aneuploidy (PGT-A) with DNA from spent culture media (SCM): concordance assessment and implication. Reprod Biol Endocrinol. 2021; 19 (1): 41.
20. Shitara A, Takahashi K, Goto M, Takahashi H, Iwasawa T, Onodera Y, et al. Cell-free DNA in spent culture medium effectively reflects the chromosomal status of embryos following culturing beyond implantation compared to trophectoderm biopsy. PLoS One. 2021; 16 (2): e0246438.
21. Xu CL, Wei YQ, Tan QY, Huang Y, Wu JJ, Li CY, et al. Concordance of PGT for aneuploidies between blastocyst biopsies and spent blastocyst culture medium. Reprod Biomed. 2023; 46 (3): 483-90.
22. Li X, Hao Y, Chen D, Ji D, Zhu W, Zhu X, et al. Non-invasive preimplantation genetic testing for putative mosaic blastocysts: a pilot study. Hum Reprod. 2021; 36 (7): 2020-34.
23. Chen R, Tang N, Du H, Yao Y, Zou Y, Wang J, et al. Clinical application of noninvasive chromosomal screening for elective single-blastocyst transfer in frozen-thawed cycles. J Transl Med. 2022; 20 (1): бб3.
24. Rubio C, Simón C. Noninvasive preimplantation genetic testing for aneuploidy: Is the glass half-empty or half-full? Fertil Steril. 2021; 11б (6): 1426-7.
25. Kakourou G, Mamas T, Vrettou C, Traeger-Synodinos J. An Update on Non-invasive Approaches for Genetic Testing of the Preimplantation Embryo. Curr Genomics. 2022; 23 (б): 337-б2.
26. Alteri A, Cermisoni GC, Pozzoni M, Gaeta G, Cavoretto PI, Vigano P Obstetric, neonatal, and child health outcomes following embryo biopsy for preimplantation genetic testing. Hum Reprod Updat. 2023; 29 (3): 291-306.
27. Makhijani R, Bartels CB, Godiwala P, Bartolucci A, DiLuigi A, Nulsen J, et al. Impact of trophectoderm biopsy on obstetric and perinatal outcomes following frozen-thawed embryo transfer cycles. Hum Reprod. 2021; 36 (2): 340-8.
2S. Awadalla MS, Park KE, Latack KR, McGinnis LK, Ahmady A, Paulson RJ. Influence of Trophectoderm Biopsy Prior to Frozen Blastocyst Transfer on Obstetrical Outcomes. Reprod Sci. 2021; 28 (12): 34б9-6б.
29. He H, Jing S, Lu CF, Tan YQ, Luo KL, Zhang SP, et al. Neonatal outcomes of live births after blastocyst biopsy in preimplantation genetic testing cycles: a follow-up of 1,721 children. Fertil Steril. 2019; 112 (2): 82-88.
30. Swanson K, Huang D, Kaing A, Blat C, Rosenstein MG, Mok-Lin E, et al. Is Preimplantation Genetic Testing Associated with Increased Risk of Abnormal Placentation After Frozen Embryo Transfer? Am J Perinatol. 2021; 38 (2): 105-10.